CDS

Accession Number TCMCG042C11180
gbkey CDS
Protein Id XP_016443316.1
Location join(17230..17351,20214..20337,20479..20576,21362..21437,21567..21686,22356..22403,22870..22934,23298..23383,23916..24080,24823..24932,25012..25117,25214..25289,26243..26301,27811..27878,28704..28918,29502..29583,30255..30511,30603..30746,31327..31384,31680..31979,32684..33409,33795..34025)
Gene LOC107768689
GeneID 107768689
Organism Nicotiana tabacum

Protein

Length 1111aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016587830.1
Definition PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000002        [VIEW IN EMBL-EBI]
GO:0000217        [VIEW IN EMBL-EBI]
GO:0000404        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0032042        [VIEW IN EMBL-EBI]
GO:0032135        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043570        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTGGGTTACGGCGAAAAACGTAGTCGTTTCAGTTCCGCGTTGGCGGTCACTCTCCCTTTTCCTCCGTCCATCACTCCCACTTCGCCGCCGCTTCTTCTCTTACTCTTTACCTCCGCTGTGCCGAGAGCGGATATGCTGCTTGAAGGAGCGAAAGTTGTTTACCACAACCGCAAGAAAACTCAAACAACCAAAAGGTGTTCCAGAGGAAAAAGACTATGTTAACATTATGTGGTGGAAAGAGAGGATGGAATTCTTGAGAAAGCCTTCTTCTGTTCTACTGGTTAAGAGGCTAACATATTGTAACTTGCTCGGTGTGGCTACAAATTTGAGAAACGGAAGTCTTAAAGATGGAACACTTAACTGGGAGATGTTGCAGTTCAAGTCAAAATTTCCGCGTGAAGTTTTACTTTGCAGAGTGGGCGATTTTTATGAAGCAATTGGATTCGATGCTTGTATTCTTGTGGAATATGCTGGATTAAATCCATTTGGTGGCCTACGTTCAGATAGTATACCGAAAGCTGGTTGTCCAGTTGTGAATCTAAGACAGACATTGGATGACCTCACACGTAATGGCTTCTCTGTGTGTGTCGTGGAGGAAGTTCAGGGTCCAACTCAAGCTCGTGCTCGTAAAAGCAGATTTATATCAGGGCATGCACATCCAGGCAGTCCCTATGTTTTTGGCCTTGTTGGAGATGATCAAGATCTTGATTTTCCAGAACCAATGCCTGTTGTTGGAATATCCCGTTCAGCGAAGGGGTATTGCGTTATCTCAGTTTATGAGACTATGAAGACTTACTCTGTGGAGGATGGCCTAACTGAAGAAGCCTTAGTTACCAAGCTTCGTACTTGTCAATGCCATCATTTGTTTTTGCATAATTCATTGAGGAACAATACTTCAGGAACATCACGTTGGGGGGAGTTTGGTGAAGGTGGACTTTTGTGGGGAGAATGTAATGCTAGACAGCACGAATGGTTGGATGGCAATCCTATTGATGAGCTTTTGTTCAAGGTAAAAGAGCTTTATGGTCTCGATGATGACATTACATTTAGAAATGTCACTGTTGTTTCAGAAAATAGGCCCCGTCCTTTACACCTTGGAACCGCCACACAAATTGGTGCTATTCCAACCGAAGGAATTCCATGTTTATTAAAGGTGTTGCTTCCTCCACACTGCAATGGTCTACCAGTTCTGTATGTTAGGGATCTTCTTTTAAATCCACCGGCCTATGAGATTGCTTCAAAACTTCAAGAGGCATGCAAACTTATGATGAGTGTCACATGTTCAATTCCTGATTTTACTTGTATTTCATCTGCAAAGCTGGTCAAGTTGCTTGAGTTGAGGGAGGCAAATCACGTAGAGTTCTGCAAAATAAAGAATGTGGTCGATGAAATACTGCAGATGTACAGAAATTCAGAGCTTCGTGCTATTTTAGAGTCACTGATGGATCCTACTTGGGTGGCAACTGGGTTAAAAGTCGATTTTGATACACTAGTAAGTGATGTTGGGGCTTCTATTCCACATCCAATTCTCACCTTCTCCGGTATTGACAAATTTGACTTAGATTTTGTTTTTGCCATTCTTGCAAAAGGCGCTTTGATATTAGATCTGATTAAGATAACAGAAGATTTCCTGCCTATTGTTTCAAGAATAAGGGCCACTACGGCCCCCCTTGGAGGAATCAAAGGGGAGATTCTGTATGCTCGAGAGCATGAAGCTGTATGGTTTAAGGGGAAGCGATTTATTCCAACTGTTTGGGCTGGAACGCCTGGTGAAGAACAAATTAAGCATCTCAGACCTGCTATAGATTCAAAGGGGAAGAAGGTTGGAGAAGAATGGTTCACTACAATGAGGGTGGAAGATGCAATAGCGAGGTACCATGACGCAAGTGCTAAGGCAAAATCAAGGGTCTTGGAATTGCTAAGGGGACTTTCTTCTGAATTACAATCTAAGATCAATATACTTATCTTTGCGTCCGTCTTGATTGTGATAACAAAGGCATTATTTTCTCATGTGAGCGAAGGGAGAAGAAGGAATTGGGTTTTCCCAACAATCACACAATTTAACAAATGTCAGGACACAAAGGCACTTAATGGAACTATGGGAATGAAGATAATTGGTCTATCCCCTTATTGGTTTGATGCAACGCGAGGTACTGGTGTACAGAATACAGTAGATATGCAGTCAATGTTTCTTTTGACAGGTCCAAATGGTGGGGGCAAATCAAGCTTGCTGCGATCATTGTGTGCAGCTGCATTGTTAGGAATGTGTGGATTCATGGTTCCAGCTGAATCAGCTGTCATTCCTCATTTTGATTCAATTATGCTGCATATGAAATCATATGATAGTCCTGCTGATGGAAAAAGTTCATTTCAGATTGAAATGTCTGAAATTCGTTCTCTGGTTACTGGTGCCACTTTAAGAAGTCTTGTGCTTATAGATGAAATATGTCGAGGAACAGAAACGGCCAAAGGGACATGTATTGCTGGAAGTGTTATAGAAACCCTGGACGCAATTGGTTGTTTGGGAATTGTATCAACCCACTTGCATGGAATTTTTGATTTACCCCTGAAAACCAAGAGGACTGTGTATAAAGCAATGGGAACTGAGTATGTTGACGGTCAAACAATACCAACTTGGAAACTTATTGATGGGGTCTGTAAAGAGAGTCTAGCATTTGAAACAGCTCAGAGAGAAGGAATTCCAGAAATATTGATTCGAAGAGCAGAAGTATTGTATAATTCAGTTTATGTGAATCAGATATCAAAGAAGAAAGACCAAATAAGACCTGTTTGTTCAGATTTTGACCTCAATAGCACAGATAAAATCTCTGACCAATTAAATGGTGCAAGACAAATAGCTTTGGATTCTAGCACAAAATTAATGCAGCGAATGGGAAGTGCAAGCAAGGAACTTGAAGATGCTATCTCTCTTATCTGTCACAAGAAGTTATTCGAGCTGTGTAAAGTGAAAAATGCGTCAGAAGTGGCAGCGGTGAAGTGTGTTCTCATTGCTGCCAGGGAACAGCCAGCTCCATCAACAATTGGTGCTTCAAGCGTATATATAATGTTAAGACCTGACAAAAATTTTTACGTTGGACAGACTGATGATCTTGAGGGCCGAATCCGTGCTCATCGGTTGAAGGAGGGAATGGAAAATGCTTCTTTCCTATATTTCTTAGTCCCTGGCAAGAGCATAGCCTGTCAACTGGAAACTCTTCTAATAAACCAACTTCCTGATTATGGCTTTCCGCTAACAAACATTGCTGATGGTAGGCATCGTAATTTTGGCACGACTAGTCTCTCCCTGGAACCTTCAACCGCGCTTAGATGA
Protein:  
MSWVTAKNVVVSVPRWRSLSLFLRPSLPLRRRFFSYSLPPLCRERICCLKERKLFTTTARKLKQPKGVPEEKDYVNIMWWKERMEFLRKPSSVLLVKRLTYCNLLGVATNLRNGSLKDGTLNWEMLQFKSKFPREVLLCRVGDFYEAIGFDACILVEYAGLNPFGGLRSDSIPKAGCPVVNLRQTLDDLTRNGFSVCVVEEVQGPTQARARKSRFISGHAHPGSPYVFGLVGDDQDLDFPEPMPVVGISRSAKGYCVISVYETMKTYSVEDGLTEEALVTKLRTCQCHHLFLHNSLRNNTSGTSRWGEFGEGGLLWGECNARQHEWLDGNPIDELLFKVKELYGLDDDITFRNVTVVSENRPRPLHLGTATQIGAIPTEGIPCLLKVLLPPHCNGLPVLYVRDLLLNPPAYEIASKLQEACKLMMSVTCSIPDFTCISSAKLVKLLELREANHVEFCKIKNVVDEILQMYRNSELRAILESLMDPTWVATGLKVDFDTLVSDVGASIPHPILTFSGIDKFDLDFVFAILAKGALILDLIKITEDFLPIVSRIRATTAPLGGIKGEILYAREHEAVWFKGKRFIPTVWAGTPGEEQIKHLRPAIDSKGKKVGEEWFTTMRVEDAIARYHDASAKAKSRVLELLRGLSSELQSKINILIFASVLIVITKALFSHVSEGRRRNWVFPTITQFNKCQDTKALNGTMGMKIIGLSPYWFDATRGTGVQNTVDMQSMFLLTGPNGGGKSSLLRSLCAAALLGMCGFMVPAESAVIPHFDSIMLHMKSYDSPADGKSSFQIEMSEIRSLVTGATLRSLVLIDEICRGTETAKGTCIAGSVIETLDAIGCLGIVSTHLHGIFDLPLKTKRTVYKAMGTEYVDGQTIPTWKLIDGVCKESLAFETAQREGIPEILIRRAEVLYNSVYVNQISKKKDQIRPVCSDFDLNSTDKISDQLNGARQIALDSSTKLMQRMGSASKELEDAISLICHKKLFELCKVKNASEVAAVKCVLIAAREQPAPSTIGASSVYIMLRPDKNFYVGQTDDLEGRIRAHRLKEGMENASFLYFLVPGKSIACQLETLLINQLPDYGFPLTNIADGRHRNFGTTSLSLEPSTALR